Branch	Locations	Status	Reservations	Due date	Barcode	Floor plan	Lending note
Branch: Hauptstelle	Locations: GE-40 206	Status: available	Reservations: 0	Due date:	Barcode: 00174866	Floor plans: Floor plan	Lending note:

1. Fabrication of cDNA Microarrays

Charlie Xiang; Michael Brownstein

pp. 1-8

2. Nylon cDNA Expression Arrays

George Jokhadze; Stephen Chen; Claire Granger; Alex Chenchik

pp. 9-30

3. Plastic Microarrays: A Novel Array Support Combining the Benefi ts of Macro- and Microarrays

Alexander Munishkin; Konrad Faulstich; Vissarion Aivazachvili; Claire Granger; Alex Chenchik

pp. 31-54

4. Preparing Fluorescent Probes for Microarray Studies

Charlie Xiang; Michael Brownstein

pp. 55-60

5. Escherichia coli Spotted Double-Strand DNA Microarrays: RNA Extraction, Labeling, Hybridization, Quality Control, and Data Management

Arkady Khodursky; Jonathan Bernstein; Brian Peter; Virgil Rhodius; Volker Wendisch; Daniel Zimmer

pp. 61-78

6. Isolation of Polysomal RNA for Microarray Analysis

Yoav Arava

pp. 79-88

7. Parallel Analysis of Gene Copy Number and Expression Using cDNA Microarrays

Jonathan Pollack

pp. 89-98

8. Genome-wide Mapping of Protein-DNA Interactions by Chromatin Immunoprecipitation and DNA Microarray Hybridization

Jason Lieb

pp. 99-110

9. Statistical Issues in cDNA Microarray Data Analysis

Gordon Smyth; Yee Yang; Terry Speed

pp. 111-136

10. Experimental Design to Make the Most of Microarray Studies

M. Kerr

pp. 137-148

11. Statistical Methods for Identifying Differentially Expressed Genes in DNA Microarrays

John Storey; Robert Tibshirani

pp. 149-158

12. Detecting Stable Clusters Using Principal Component Analysis

Asa Ben-Hur; Isabelle Guyon

pp. 159-182

13. Clustering in Life Sciences

Ying Zhao; George Karypis

pp. 183-218

14. A Primer on the Visualization of Microarray Data

Paul Fawcett

pp. 219-234

15. Microarray Databases: Storage and Retrieval of Microarray Data

Gavin Sherlock; Catherine Ball

pp. 235-248

 

Abstract:

This collection of robust, readily reproducible methods for microarray-based studies includes expert guidance in the optimal data analysis and informatics. On the methods side are proven techniques for monitoring subcellular RNA localization en masse, for mapping chromosomes at the resolution of a single gene, and for surveying the steady-state genome-wide distribution of DNA binding proteins in vivo. For those workers dealing with massive data sets, the book discusses the methodological aspects of data analysis and informatics in the design of microarray experiments, the choice of test statistic, and the assessment of observational significance, data reduction, and clustering.