Volume 41 of Methods in Microbiology is a methods book designed to highlight procedures that will revitalize the purposes and practices of prokaryotic systematics.
This volume will notably show that genomics and computational biology are pivotal to the new direction of travel and will emphasise that new developments need to be built upon historical good practices, notably the continued use of the nomenclatural type concept and the requirement to deposit type strains in at least two service culture collections in different countries.
TOC:
The Need for Change: Embracing the Genome
William B. Whitman
An Introduction to Phylogenetics and The Tree of Life1
Tom A. Williams and Sarah E. Heap
The All-Species Living Tree Project
Pablo Yarza and Raul Munoz
16S rRNA Gene-based Identification of Bacteria and Archaea using the EzTaxon Server
Mincheol Kim and Jongsik Chun
Revolutionising Prokaryotic Systematics Through Next-Generation Sequencing
Vartul Sangal, Leena Nieminen, Nicholas P. Tucker and Paul A. Hoskisson
Whole Genome Analyses: Average Nucleotide Identity
David R. Arahal
Whole-Genome Sequencing for Rapid and Accurate Identification of Bacterial Transmission Pathways
Simon R. Harris and Chinyere K. Okoro
Identification of Conserved Indels that are useful for Classification and Evolutionary Studies
Radhey S. Gupta
Reconciliation Approaches to Determining HGT, Duplications, and Losses in Gene Trees
Olga K.Kamneva and Naomi L. Ward
Multi-locus Sequence Typing and the Gene-by-Gene Approach to Bacterial Classification and Analysis of Population Variation
Alison J. Cody, Julia S. Bennett and Martin C.J. Maiden
Multilocus Sequence Analysis: Bringing Bacterial Systematics to the Next Level
Xiaoying Rong and Ying Huang
Bacterial Typing and Identification by Genomic Analysis of 16s-23s rRNA Intergenic Spacer (ITS) Sequences
Volker Gärtler, Gangavarapu Subrahmanyam, Malathi Shakar, Biswajit Maiti and Indrani Karunasagar
MALDI-TOF Mass Spectrometry Applied to Classification and Identification of Bacteria
Peter Schumann and Thomas Maier
Continuing Importance of the â??Phenotypeâ? in the Genomic Era
Peter Kämpfer
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Verfasserangabe:
edited by Michael Goodfellow ; Iain Sutcliffe ; Jongsik Chun
Jahr:
2014
Verlag:
Amsterdam, Elsevier Academic Press
Aufsätze:
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Regalstandort W0.40
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Systematik:
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MB-80, MB-22
Interessenkreis:
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Sammelwerk
ISBN:
978-0-12-800176-9
2. ISBN:
0-12-800176-3
Beschreibung:
XIX, 327 S. : Ill., graph. Darst.
Sprache:
Englisch
Fußnote:
Literaturangaben
Mediengruppe:
Serien